- In Press
- Petes, L. E., B. A. Menge, and G. D. Murphy, In Press. Intertidal stress decreases survival, growth, and reproduction in New Zealand mussels. Journal of Experimental Marine Biology and Ecology.
- White, J. W., and R. R. Warner, In Press. Safety-in-numbers and the spatial scaling of density dependence in a coral reef fish. Ecology
- Woodson, C. B., D. I. Eerkes-Medrano, A. Flores-Morales, M. M. Foley, S. K. Henkel, M. Hessing-Lewis, D. Jacinto, L. Needles, M. T. Nishizaki, J. O'Leary, C. E. Ostrander, M. Pespeni, K. B. Schwager, J. A. Tyburczy, K. A. Weersing, A. R. Kirincich, J. A. B, In Press. Local diurnal upwelling driven by sea breezes in northern Monterey Bay. Continental Shelf Research
- Blanchette, C. A., P. T. Raimondi, and B. R. Broitman., In Press. Spatial patterns of intertidal community structure across the California Channel Islands and links to ocean temperature. Proceedings of the California Islands Symposium.
- Burford, M. O., and G. Bernardi., In Press. Incipient speciation within a subgenus of rockfish (Sebastosomus) provides evidence of recent radiations within an ancient species flock. Marine Biology.
- Cuddack, C. and E. McPhee., In Press. Diurnal Period Internal Waves near Point Conception, California. Estuarine, Coastal, and Shelf Science.
- Dong, Y., and G. N. Somero., In Press. Temperature adaptation of cytosolic malate dehydrogenases of limpets (genus Lottia): differences in stability and function due to minor changes in sequence correlate with biogeographic and vertical distributions. The Journal of Experimental Biology.
- Freiwald, J., N. L. Stewart, D. C. Yates, and G. Bernardi., In Press. Isolation and characterization of nine polymorphic microsatellite loci of the kelp greenling, Hexagrammos decagrammus, a temperate reef fish. Molecular Ecology Resources.
- Harley, C. D. G., M. W. Denny, K. J. Mach, and L. P. Miller., In Press. Thermal stress and morphological adaptations in limpets. Functional Ecology.
- Hofmann, G. E., and M. J. O'Donnell., In Press. Using functional genomics to explore the impacts of ocean acidification on calcifying marine organisms. Marine Ecology Progress Series.
- Kavanaugh, M. T., K. J. Nielsen, F. T. Chan, B. A. Menge, R. M. Letelier, and L. M. Goodrich., In Press. Experimental assessment of the effects of shade on an intertidal kelp: Do phytoplankton blooms inhibit growth of open coast macroalgae? Limnology and Oceanography.
- Kirincich, A., and J. A. Barth., In Press. Time-varying Ekman transport and vertical eddy viscosity on the inner shelf. Journal of Physical Oceanography.
- Kirincich, A. K., and J. A. Barth., In Press. Along-shelf variability of inner-shelf circulation along the central Oregon coast during summer. Journal of Physical Oceanography.
- Menge, B. A., and M. Foley., In Press. Barnacle recruitment and the study of intertidal community dynamics: do settlement surface and limpet disturbance matter? Limnology and Oceanography
- O'Donnell, M. J., L. M. Hammond, and G. E. Hofmann., In Press. Predicted impact of ocean acidification on a marine invertebrate: elevated CO2 alters response to thermal stress in sea urchin larvae. Marine Biology.
- 2008
- Bellquist, L., C. Lowe, and J.E. Caselle., 2008. Fine-scale movement patterns, site fidelity, and habitat selection of ocean whitefish (Caulolatilus princeps). Fisheries Research. 91:325-335
- Blanchette, C. A., P. T. Raimondi, C. M. Miner, D. Lohse, K. Heady, and B. Broitman., 2008. Biogeographic patterns of rocky intertidal communities along the Pacific coast of North America. Journal of Biogeography 35:1593-1607
- Broitman, B., C. A. Blanchette, B. A. Menge, J. Lubchenco, C. Krenz, M. M. Foley, P. T. Raimondi, D. Lohse, and S. D. Gaines., 2008. Spatial and temporal patterns of invertebrate recruitment along the West coast of the United States Ecological Monographs 78:S81-S90
- Chan, F., J. A. Barth, J. Lubchenco, A. Kirincich, H. Weeks, W. T. Peterson, and B. A. Menge., 2008. Emergence of Anoxia in the California Current Large Marine Ecosystem. Science 319:920
- Dong, Y., L. P. Miller, J. G. Sanders, and G. N. Somero., 2008. Heat-shock protein 70 (Hsp70) expression in four limpets of the genus Lottia: Interspecific variation in constitutive and inducible synthesis correlates with in situ exposure to heat stress. Biological Bulletin 215:173-181
- Dudas, S. E., B. A. Grantham, A. R. Kirincich, B. A. Menge, J. Lubchenco, and J. A. Barth., 2008. Current reversals as determinants of intertidal recruitment on the central Oregon coast. ICES Journal of Marine Science 66
- Evans, T. G., and G. N. Somero., 2008. A microarray-based transcriptomic time-course of hyper- and hypo-osmotic stress signaling events in the euryhaline fish Gillichthys mirabilis: osmosensors to effectors. The Journal of Experimental Biology 211:3636-3649
- Gracey, A. Y., M. L. Chaney, J. P. Boomhower, W. R. Tyburczy, K. Connor, and G. N. Somero., 2008. Rhythms of gene expression in a fluctuating intertidal environment. Current Biology 18:1501-1507
- Guerry, A. D., 2008. Interactive effects of grazing and enrichment on diversity; conceptual implications of a rocky intertidal experiment. Oikos 117:1185?1196
- Hamilton, S. L., 2008. Larval history influences post-metamorphic condition in a coral reef fish. Oecologia 158:449-461
- Hamilton, S. L., J. Regetz, and R. R. Warner., 2008. Postsettlement survival linked to larval life in a marine fish. PNAS 105 (5): 1561?1566
- Henkel, S. K., and G. E. Hofmann., 2008. Thermal ecophysiology of gametophytes cultured from invasive Undaria pinnatifida (Harvey) Suringar in coastal California harbors. Journal of Experimental Marine Biology and Ecology 367:164-173
- Hofmann, G. E., and S. D. Gaines., 2008. New Tools to Meet New Challenges: Emerging Technologies for Managing Marine Ecosystems for Resilience. Bioscience 58:43-52
- Hunt, L. J. H., and M. W. Denny., 2008. Desiccation Protection and Disruption: A tradeoff for an Intertidal Marine Alga. Journal of Phycology 44:1164-1170
- Kellner, J., Nisbet, and S. D. Gaines., 2008. Spillover from marine reserves related to mechanisms of population regulation. Theoretical Ecology 1:117-127
- Klein, C. J., A. Chan, L. Kircher, A. Cundiff, Y. Hrovat, N. Gardner, B. E. Kendall, A. Scholz, and S. Airame., 2008. Striking a balance between biodiversity conservation and socioeconomic viability in marine protected area design. Conservation Biology 22: 691 - 700
- Lester, S. E., and B. S. Halpern., 2008. Biological responses in marine no-take reserves versus partially protected areas. Marine Ecology Progress Series 367:49-56
- Madin, J. S., M. J. O?Donnell, and S. R. Connolly., 2008. Climate-mediated mechanical changes to post-disturbance coral assemblages. Biology Letters 4:490-493
- Martone, P. T., and M. W. Denny., 2008. To bend a coralline: effect of joint morphology on flexibility and stress amplification in an articulated calcified seaweed. Journal of Experimental Biology 211:3421-3432
- Martone, P. T., and M. W. Denny., 2008. To break a coralline: mechanical constraints on the size and survival of a wave-swept seaweed. Journal of Experimental Biology 211:3433-3441
- Navarrete, S. A., B. R. Broitman, and B. A. Menge., 2008. Interhemispheric comparison of recruitment to rocky intertidal communities:pattern persistence and scales of variation. Ecology 89:1308-1322
- O'Donnell, M., 2008. Reductions of wave forces within bare patches in mussel beds. Marine Ecology Progress Series 362:157-167
- O'Donnell, M. J., and M. W. Denny., 2008. Hydrodynamic forces and surface topography: Centimeter-scale spatial variation in wave forces Limnology and Oceanography 53:579-588.
- Palumbi, S. P., K. L. McLeod, and D. Grunbaum., 2008. Ecosystems in Action: Lessons from Marine Ecology about Recovery, Resistance, and Reversibility. Bioscience 58:33-42
- Petes, L. E., B. A. Menge, F. Chan, and M. A. H. Webb., 2008. Gonadal tissue color is not a reliable indicator of sex in rocky intertidal mussels. Aquatic Biology 3:63-70
- Petes, L. E., B. A. Menge, and A. L. Harris., 2008. Intertidal mussels exhibit energetic trade-offs between reproduction and stress resistance. Ecological Monographs 78:387-402
- Petes, L. E., Mouchka, M.E. , R. H. Milston-Clements, T. S. Momoda, and B. A. Menge., 2008. Effects of environmental stress on intertidal mussels and their sea star predators. Oecologia 156:671–680
- Place, S. P., M. J. O?Donnell, and G. E. Hofmann., 2008. Gene expression profiling in the intertidal mussel, Mytilus californianus: Assessing physiological response to environmental factors on a biogeographic scale. Marine Ecology Progress Series 356:1-14
- Rilov, G., S. E. Dudas, B. A. Menge, B. A. Grantham, J. Lubchenco, and D. R. Schiel., 2008. The surf zone: a semi-permeable barrier to onshore recruitment of invertebrate larvae? Journal of Experimental Marine Biology and Ecology 361:59-74
- Ritter, A. F., 2008. Habitat variation influences movement rates and population structure of an intertidal fish. Oecologia 157:1432-1939
- Ruttenberg, B. I., 2008. Spatial and temporal variation in the natal otolith chemistry in a Hawaiian reef fish: prospects for measuring population connectivity. Canadian Journal of Fisheries and Aquatic Sciences 65:1181-1192
- Selkoe, K. A., C. M. Henzler, and S. D. Gaines., 2008. Seascape genetics and the spatial ecology of marine populations. Fish and Fisheries 9:363-377
- Siegel, D. A., S. Mitarai, C. J. Costello, S. D. Gaines, B. E. Kendall, R. R. Warner, and K. B. Winters., 2008. The stochastic nature of larval connectivity among nearshore marine populations. Proceedings of the National Academy of Sciences 105:8974-8979
- Standish, J. D., M. Sheehy, and R. R. Warner., 2008. Use of otolith natal elemental signatures as natural tags to evaluate connectivity among open-coast fish populations. Marine Ecology Progress Series 356:259-268
- White, J. W., 2008. Spatially coupled larval supply of marine predators and their prey alters the predictions of metapopulation models. American Naturalist 171:E179?E194
- White, J. W., and J. E. Caselle., 2008. Scale-dependent changes in the importance of larval supply and habitat to abundance of a temperate reef fish. Ecology 89:1323-1333.
- 2007
- Blanchette, C. A., and S. D. Gaines., 2007. Distribution, Abundance, Size and Recruitment of the mussel, Mytilus californianus, across a major oceanographic and biogeographic boundary at Point Conception, California, USA. Journal Experimental Marine Biology and Ecology 340:268-279.
- Blanchette, C. A., B. Helmuth, and S. D. Gaines., 2007. Spatial patterns of growth in the mussel, Mytilus californianus, across a major oceanographic and biogeographic boundary at Point Conception, California, USA. Journal Experimental Marine Biology and Ecology 340:126-148.
- Cole, R. G., C. Syms, N. K. Davey, N. Gust, P. Notman, R. Stewart, C. Radford, G. Carbines, M. H. Carr, and A. G. Jeffs., 2007. Does breathing apparatus affect fish counts and observations? A comparison at three New Zealand fished and protected areas. Marine Biology 150:1379-1395.
- Freidenburg, T.L., B.A. Menge, P.M. Halpin, M. Webster, and A.Sutton-Grier., 2007. Cross-scale variation in top-down and bottom-up control of algal abundance. Journal of Experimental Marine Biology and Ecology. 347: 8-29.
- Hays, C., 2007. Adaptive phenotypic differentiation across the intertidal gradient in the alga Silvetia compressa. Ecology 88:149-157
- Hofmann, G. E., and S. P. Place., 2007. Genomics-enabled research in marine ecology: Challenges, risks & pay-offs. Marine Ecology Progress Series. 332: 249-255
- Johnson, D.W., 2007. Habitat complexity modifies post-settlement mortality and recruitment dynamics of a marine fish. Ecology 88:1716-1725.
- Kellner, J.B., I. Tetreault, S.D. Gaines, and R.M. Nisbet., 2007. Fishing-the-line near marine reserves in single and multi-species fisheries. Ecological Applications. 17:1039-1054.
- Lester, S. E., E. D. Tobin, et al., 2007. Disease dynamics and the potential role of thermal stress in the sea urchin, Strongylocentrotus purpuratus. Canadian Journal of Fisheries and Aquatic Sciences 64:314-323.
- Miller, L. P., and B. Gaylord., 2007. Barriers to flow: the effects of experimental cage structures on water velocities in high-energy subtidal and intertidal environments. Journal Experimental Marine Biology and Ecology 344:215-228.
- Miller, L.P., M.J. O'Donnell, and K.J. Mach., 2007. Dislodged but not dead: survivorship of a high intertidal snail following wave dislodgement. Journal of the Marine Biological Association of the United Kingdom. 87:735-739.
- Pfeiffer-Herbery, A.S., M.A. McManus, P.T. Raimondi, Y.Chao, and F.Chai., 2007. Dispersal of barnacle larvae along the central California coast: A modeling study. Limnology and Oceanography. 52:1559-1569.
- Phillips, N. E., 2007. High variability in egg size and energetic content among intertidal mussels. Biological Bulletin 212:12-19.
- Raimondi, P., R. Sagarin, R. F. Ambrose, C. Bell, M. George, S. F. Lee, D. Lohse, C. M. Miner, and S. N. Murray., 2007. Consistent Frequency of Color Morphs in the Sea Star Pisaster ochraceus (Echinodermata: Asteriidae) across Open-Coast Habitats in the Northeastern Pacific. Pacific Science 61:201-210.
- Webster, M.S., J.D. Osborne-Gowey, T.H. Young, T.L. Freidenburg, and B.A. Menge., 2007. Persistent regional variation in populations of a tidepool fish. Journal of Experimental Marine Biology and Ecology. 346:8-20.
- White, J. W., and B. I. Ruttenberg., 2007. Discriminant function analysis in marine ecology: some oversights and their solutions. Marine Ecology Progress Series 329:301-305.
- Barnett-Johnson, R., C. B. Grimes, C. F. Royer, and C. J. Donohoe., 2007. Identifying the contribution of wild and hatchery Chinook salmon (Oncorhynchus tshawytscha) to the ocean fishery using otolith microstructure as natural tags. Canadian Journal of Fisheries and Aquatic Sciences 64:1683-1692
- Barth, J. A., B. A. Menge, J. Lubchenco, F. Chan, J. M. Bane, A. R. Kirincich, M. A. McManus, K. J. Nielsen, S. D. Pierce, and L. Washburn., 2007. Delayed upwelling alters nearshore coastal ocean ecosystems in the northern California current. Proceedings of the National Academy of Sciences 104:3719-3724
- Blanchette, C. A., and S. D. Gaines., 2007. Distribution, Abundance, Size and Recruitment of the mussel, Mytilus californianus, across a major oceanographic and biogeographic boundary at Point Conception, California, USA. Journal Experimental Marine Biology and Ecology 340:268-279
- Blanchette, C. A., B. Helmuth, and S. D. Gaines., 2007. Spatial patterns of growth in the mussel, Mytilus californianus, across a major oceanographic and biogeographic boundary at Point Conception, California, USA. Journal Experimental Marine Biology and Ecology 340:126-148
- Cole, R. G., C. Syms, N. K. Davey, N. Gust, P. Notman, R. Stewart, C. Radford, G. Carbines, M. H. Carr, and A. G. Jeffs., 2007. Does breathing apparatus affect fish counts and observations? A comparison at three New Zealand fished and protected areas. Marine Biology 150:1379-1395
- Freidenburg, T. L., B. A. Menge, P. M. Halpin, M. Webster, and A. Sutton-Grier., 2007. Cross-scale variation in top-down and bottom-up control of algal abundance. Journal of Experimental Marine Biology and Ecology 347:8-29
- Hamilton, S. L., J. E. Caselle, J. D. Standish, D. M. Schroeder, M. S. Love, J. A. Rosales-Casian, and O. Sosa-Nishizaki., 2007. Size-selective harvesting alters life histories of a temperate sex-changing fish. Ecological Applications 17:2268-2280
- Hays, C., 2007. Adaptive phenotypic differentiation across the intertidal gradient in the alga Silvetia compressa. Ecology 88:149-157
- Henkel, S. K., and G. E. Hofmann., 2007. Differing patterns of hsp70 gene expression in invasive and native kelp species: evidence for acclimation-induced variation. Journal of Applied Phycology
- Henkel, S. K., G. E. Hofmann, and A. C. Whitmer., 2007. Morphological and genetic variation in Egregia menziesii over a latitudinal gradient. Botanica Marina 50:159-170
- Hofmann, G. E., and S. P. Place., 2007. Genomics-enabled research in marine ecology: Challenges, risks and pay-offs. Marine Ecology Progress Series 332:249-255
- Johnson, D. W., 2007. Habitat complexity modifies post-settlement mortality and recruitment dynamics of a marine fish. Ecology 88:1716-1725
- Jones, C., C. A. Blanchette, M. Brooke, J. Harris, M. Jones, and M. Schildhauer., 2007. A metadata-driven framework for generating field data entry interfaces in ecology. Ecological Informatics 2:270-278
- Kellner, J. B., I. Tetreault, S. D. Gaines, and R. M. Nisbet., 2007. Fishing-the-line near marine reserves in single and multi-species fisheries. Ecological Applications 17:1039-1054
- Lester, S. E., S. D. Gaines, and B. P. Kinlan., 2007. Reproduction on the edge: large-scale patterns of individual performance in a marine invertebrate. . Ecology 88:2229?2239
- Lester, S. E., B. I. Ruttenberg, S. D. Gaines, and B. P. Kinlan., 2007. The relationship between dispersal ability and geographic range size. Ecology Letters 10:745-758
- Lester, S. E., E. D. Tobin, and M. D. Behrens., 2007. Disease dynamics and the potential role of thermal stress in the sea urchin, Strongylocentrotus purpuratus. Canadian Journal of Fisheries and Aquatic Sciences 64 314-323
- Martone, P. T., 2007. Kelp versus coralline: cellular basis for mechanical strength in the wave-swept seaweed Calliarthron (Corallinaceae, Rhodophyta). Journal of Phycology 43:882?891
- Menge, B. A., B. A. Daley, E. Sanford, E. P. Dahlhoff, and J. Lubchenco., 2007. Mussel zonation in New Zealand:an integrative eco-physiological approach. Marine Ecology Progress Series 345:129-140
- Miller, L. P., 2007. Feeding in extreme flows: behavior compensates for mechanical constraints in barnacle cirri. Marine Ecology Progress Series 349:227-234
- Miller, L. P., and B. Gaylord., 2007. Barriers to flow: the effects of experimental cage structures on water velocities in high-energy subtidal and intertidal environments. Journal Experimental Marine Biology and Ecology 344:215-228
- Miller, L. P., M. J. O'Donnell, and K. J. Mach., 2007. Dislodged but not dead: survivorship of a high intertidal snail following wave dislodgement. Journal of the Marine Biological Association of the United Kingdom 87:735-739
- Osovitz, C. J., and G. E. Hofmann., 2007. Marine Macrophysiology: Studying physiological variation across large spatial scales in marine systems. Comparative Biochemistry and Physiology
- Petes, L. E., B. A. Menge, and G. D. Murphy., 2007. Environmental stress decreases survival, growth, and reproduction in New Zealand mussels. Journal of Experimental Marine Biology and Ecology 351:83-91
- Pfeiffer-Hoyt, A. S., M. A. McManus, P. T. Raimondi, Y. Chao, and F. Chai., 2007. Dispersal of barnacle larvae along the central California coast: A modeling study. Limnology and Oceanography 52:1559-1569
- Phillips, N., 2007. A spatial gradient in the potential reproductive output of the sea mussel Mytilus californianus. Marine Biology 151:1543-1550
- Phillips, N. E., 2007. High variability in egg size and energetic content among intertidal mussels. Biological Bulletin 212:12-19
- Raimondi, P., R. Sagarin, R. F. Ambrose, C. Bell, M. George, S. F. Lee, D. Lohse, C. M. Miner, and S. N. Murray., 2007. Consistent Frequency of Color Morphs in the Sea Star Pisaster ochraceus (Echinodermata: Asteriidae) across Open-Coast Habitats in the Northeastern Pacific. Pacific Science 61:201-210
- Selkoe, K. A., A. Vogel, and S. D. Gaines., 2007. Effects of ephemeral circulation on recruitment and connectivity of nearshore fish populations spanning Southern and Baja California. Marine Ecology Progress Series. 351:209-220
- Webster, M. S., J. D. Osborne-Gowey, T. H. Young, T. L. Freidenburg, and B. A. Menge., 2007. Persistent regional variation in populations of a tidepool fish. Journal of Experimental Marine Biology and Ecology 346:8-20
- White, J. W., 2007. Spatially correlated recruitment of a marine predator and its prey shapes the large-scale pattern of density-dependent prey mortality. . Ecology Letters 10:1054-1065
- White, J. W., and B. I. Ruttenberg., 2007. Discriminant function analysis in marine ecology: some oversights and their solutions. Marine Ecology Progress Series 329:301-305
- White, J. W., and R. R. Warner., 2007. Behavioral and energetic costs of group membership in a coral reef fish. Oecologia
- Wieters, E. A., S. D. Gaines, S. A. Navarrete, C. A. Blanchette, and B. A. Menge., 2007. Scales of Dispersal and the Biogeography of Marine Predator-Prey Interactions. The American Naturalist 171:405-417
- Woodson, C. B., and M. A. McManus., 2007. Foraging behavior can influence dispersal of marine organisms. Limnology and Oceanography. 56(2): 2701-2709
- 2006
- Blanchette, C.A., B. R. Broitman, and S. D. Gaines., 2006. Intertidal community structure and oceanographic patterns around Santa Cruz Island, California, USA. Marine Biology 149:689-701.
- Braby, C. E., and G. N. Somero., 2006. Ecological gradients and relative abundance of native (Mytilus trossulus) and invasive (M. galloprovincialis) blue mussels in the California hybrid zone. Marine Biology 148:1249-1262.
- Braby, C.E., and G.N. Somero., 2006. Following the heart: temperature and salinity effects on heart rate in native and invasive species of blue mussels (genus Mytilus) Journal of Experimental Biology 209: 2554-2566.
- Broitman, B. R., and B. P. Kinlan., 2006. Spatial scales of benthic and pelagic producer biomass in a coastal upwelling ecosystem Marine Ecology Progress Series 327:15-25.
- Brown, J., 2006. Using the chemical composition of otoliths to evaluate the nursery role of estuaries for English sole (Pleuronectes vetulus) populations in central California. Marine Ecology Progress Series 306:269-281.
- Brown, J. A., 2006. Classification of juvenile flatfishes to estuarine and coastal habitats based on the elemental composition of otoliths. Estuarine, Coastal and Shelf Sciences 66:594-611.
- Buckley, B. A., A. Y. Gracey, and G. N. Somero., 2006. The cellular response to heat stress in the goby Gillichthys mirabilis: A cDNA microarray and protein-level analysis. The Journal of Experimental Biology 209:2660-2677.
- Carr, M. H., and C. Syms., 2006. Recruitment: the replenishment of demersal fish populations. Pages 1248-1316 in L. Allen, D. J. P. II, and M. H. Horn, editors. The Ecology of California Marine Fishes. University of California Press, Berkeley, CA.
- Denny, M. W., and C. C. D. Harley., 2006. Hot limpets: predicting body temperature in a conductance-mediated thermal system. Journal of Experimental Biology 209:2409-2419.
- Denny, M. W., L. P. Miller, and C. C. D. Harley., 2006. Thermal stress on intertidal limpets: long-term hindcasts and lethal limits. Journal of Experimental Biology 209:2420-2431.
- Emery, B., L. Washburn, M. Love, M. Nishimoto, and J. Ohlmann., 2006. Do oil and gas platforms off California reduce recruitment of bocaccio (Sebastes paucispinis) to natural habitat? An analysis based on trajectories derived from high frequency radar. Fishery Bulletin 104:391-400.
- Fields, P. A., E. L. Rudomin, and G. N. Somero., 2006. Temperature sensitivities of cytosolic malate dehydrogenases from native and invasive species of marine mussels (genus Mytilus): sequence-function linkages and correlations with biogeographic distribution. Journal of Experimental Biology 209:656-667.
- Gaylord, B., D. C. Reed, P. T. Raimondi, and L. Washburn., 2006. Macroalgal spore dispersal in coastal environments: Mechanistic insights revealed by theory and experiment. Ecological Monographs 76:481-502.
- Helmuth, B., B. R. Broitman, C. A. Blanchette, S. Gilman, P. Halpin, C. D. G. Harley, M. J. O'Donnell, G. E. Hofmann, B. Menge, and D. Strickland., 2006. Mosaic patterns of thermal stress in the rocky intertidal zone: implications for climate change. Ecological Monographs . 74:461-479.
- Johnson, D. W., 2006. Density dependence in marine fish populations revealed at small and large spatial scales. Ecology 87:319-325.
- Johnson, D. W., 2006. Predation, habitat complexity and variation in density-dependent mortality of temperate reef fishes. Ecology 87:1179-1188.
- Martone, P. T., 2006. Size, strength and allometry of joints in the articulated coralline Calliarthron Journal of Experimental Biology 209:1678-1689.
- Miner, M. C., J.M. Altstatt, P.T. Raimondi, and T. E. Minchinton., 2006. Recruitment failure and shifts in community structure following mass mortality of black abalone limit its prospects for recovery. Marine Ecology Progress Series 327:107-117.
- Nielsen, K., C. Blanchette, B. Menge, and J. Lubchenco., 2006. Physiological snapshots reflect ecological performance of the Sea Palm, Postelsia palmaeformis (Phaeophycaea) across intertidal elevation and exposure gradients. Journal of Phycology 42:548-559.
- Reed, D. C., B P. Kinlan, P.T. Raimondi, L. Washburn, B. Gaylord, and P. T. Drake., 2006. A Metapopulation Perspective on Patch Dynamics and Connectivity of Giant Kelp. Pages 576 in J. P. Kritzer and P. F. Sale, editors. Marine Metapopulations. Academic Press, San Diego, California.
- Reed, D. C., P. T. Raimondi, L. Washburn, B. Gaylord, B. P. Kinlan, and P. T. Drake., 2006. The metapopulation ecology of giant kelp. in P. F. Sale and J. Kritzer, editors. Marine metapopulations. Academic Press, San Diego, California.
- Ritter, A.F. and R. K. Preisler., 2006. Spatial variation in the structure of an intertidal fish assemblage reflects daily settlement patterns. Marine Ecology Progress Series 317:211-223.
- Russell, R., S. A. Wood, G. Allison, and B. A. Menge., 2006. Scale, Environment, & Trophic Status: The Context-Dependency of Community Saturation in Rocky Intertidal Communities. American Naturalist 1 67:E158-E170.
- Sagarin, R., 2006. Recent studies improve understanding of population dynamics across species ranges. Oikos 115: 386-388.
- Sagarin, R., and G. N. Somero., 2006. Complex patterns of heat-shock protein 70 expression across the southern biogeographic ranges of the intertidal mussel Mytilus californianus and the snail Nucella ostrina. Journal of Biogeography 33:622-630.
- Sagarin, R., S. D. Gaines, and B. Gaylord., 2006. Moving beyond assumptions to understand abundance distributions across the ranges of species. Trends in Ecology and Evolution 21:524-530.
- Sagarin, R., R. F. Ambrose, B. J. Becker, J.M. Engle, J. Kido, S.F. Lee, C. M. Miner, S.N. Murray, P.T. Raimondi, D. Richards, and C. Roe., 2006. Ecological impacts on the limpet Lottia gigantea populations: human pressure over a broad scale on island and mainland intertidal zones. Marine Biology 1-15.
- Schoch, G.C., B.A. Menge, G. Allison, M. Kavanaugh, S.A. Thompson, and S.A. Wood., 2006. Fifteen degrees of separation: Latitudinal gradients of rocky intertidal biota along the California Current. Limnology and Oceanography 51:2564-2585.
- Selkoe, K. A., and R. J. Toonen., 2006. Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecology Letters 9:615-629.
- Selkoe, K. A., S. D. Gaines, J. E. Caselle, and R. R. Warner., 2006. Current shifts and kin aggregation explain genetic patchiness in fish recruits. Ecology 87:3082-3094.
- Thornber, C., J. J. Stachowicz, and S. Gaines., 2006. Tissue type matters: Selective herbivory on different life history stages of an isomorphic alga. Ecology 87: 2255-2263.
- Vinueza, L. R., G. M. Branch, M. L. Branch, and R. H. Bustamante., 2006. Top-Down Herbivory and Bottom-Up El Niño Effects on Galápagos Rocky-Shore Communities. Ecological Monographs 87.
- 2005
- Airamé, S., 2005. The Channel Islands Marine Reserves: Scientists informing policy and management. In Groom, M.J., G.K. Meffe, and C.R. Carroll (eds). Principles of Conservation Biology (3rd Edition). Sinauer Associates, Inc. Sunderland, Massachusetts. Pp 544-547.
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- Baskett, M. L., S. A. Levin, S. D. Gaines, and J. Dushoff., 2005. Marine reserve design and the evolution of size at maturation in harvested fish. Ecological Applications. 15:882-901.
- Bassin, C. J., L. Washburn, M. Brzezinski, and E. McPhee-Shaw., 2005. Sub-mesoscale coastal eddies observed by high frequency radar:A new mechanism for delivering nutrients to kelp forests in the Southern California Bight. Geophysical Research Letters 32:L12604.
- Broitman, B. R., C. A. Blanchette, and S. D. Gaines., 2005. Recruitment of intertidal invertebrates and oceanographic variability at Santa Cruz Island, California, U.S.A. Limnology and Oceanography 50: 1473-1479.
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- Cudaback, C., L. Washburn, and E. Dever., 2005. Subtidal Inner-Shelf Circulation Near Point Conception, California. Journal of Geophysical Research (Oceans) 110:C10007.
- Drake, P. J., M. A. McManus, and C. Storlazzi., 2005. Local wind forcing of the Monterey Bay area inner shelf. Continental Shelf Research 25:397-417.
- Gaylord, B., S.D. Gaines, D.A. Siegel, and M. H. Carr., 2005. Marine reserves can exploit life history and population structure to potentially increase fisheries yields. Ecological Applications 15:2180-2191.
- Guerry, A. D., 2005. Icarus and Daedlus: Conceptual and tactical lessons for marine ecosystem-based management. Frontiers in Ecology and the Environment 3:202-211.
- Guichard, F., 2005. Interaction strength and extinction risk in a metacommunity. Proceedings of the Royal Society of London B 272:1571-1576.
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- Hofmann, G. E., J. L. Burnaford, and K. T. Fielman., 2005. Genomics-fueled approaches to meet current challenges in marine ecology. Trends in Ecology and Evolution 20:305-311.
- Kinlan, B. P., Gaines, S.D. and Lester, S.E., 2005. Propagule dispersal and the scales of marine community process. Diversity & Distributions 11:139-148.
- Kinlan, B. P., and A. M. Hastings., 2005. What exotic species tell us about rates of population spread and geographic range expansion. in D. F. Sax, S. D. Gaines, and J. J. Staichowicz, editors. Species Invasions: Insights to Ecology, Evolution and Biogeography. Island Press, Washington D.C.
- Kirincich, A. R., J.A. Barth, B.A. Grantham, B. A. Menge, and J. Lubchenco., 2005. Wind-driven inner-shelf circulation off central Oregon during summer. Journal of Geophysical Research (Oceans) 110, C10S03, doi:10.1029/2004JC002611.
- Leslie, H., 2005. Positive intraspecific effects trump negative effects in high-density barnacle aggregations. Ecology 86:2716-2725.
- Leslie, H., 2005. A Synthesis of Marine Conservation Planning Approaches. Conservation Biology 19:1701-1713.
- Leslie, H. M., E. N. Breck, F. Chan, B. A. Menge, and J. Lubchenco., 2005. Barnacle reproductive hotspots linked to nearshore ocean conditions. Proceedings of the National Academy of Sciences 102:10534-10539.
- Lester, S. E., and B. I. Ruttenberg., 2005. The relationship between pelagic larval duration and range size in tropical reef fishes: a synthetic analysis. Proceedings of the Royal Society of London Series B-Biological Sciences 272:585-591.
- Menge, B. A., G.W. Allison, C.A. Blanchette, T.M. Farrell, A.M. Olson, T.A. Turner, and P. van Tamelen., 2005. Stasis or kinesis? Hidden dynamics of a rocky intertidal macrophyte mosaic revealed by a spatially-explicit approach. Journal of Experimental Marine Biology and Ecology 314:3-39.
- Osovitz, C. J., and G. E. Hofmann., 2005. Thermal history-dependent expression of the hsp70 gene in purple sea urchins: Biogeographic patterns and the effect of temperature acclimation. Journal of Experimental Marine Biology and Ecology 327:134-143.
- Parmesan, C., S. D. Gaines, L. Gonzalez, D. Kaufman, J. Kingsolver, A. T. Peterson, and R. Sagarin., 2005. Empirical perspectives on species borders: from traditional biogeography to global change. Oikos 108:58-75.
- Phillips, N. E., 2005. Growth of filter-feeding benthic invertebrates from a region with variable upwelling intensity. Marine Ecology Progress Series 295:79-89.
- Readdie, M.D., Marla Ranelletti, and R. M. McCourt., 2005. Common Seaweeds of the Gulf of California, 1 edition. Sea Challengers, Gig Harbor, WA.
- Ruttenberg, B. I., A. J. Haupt, A. I. Chiriboga, and R. R. Warner., 2005. Patterns, causes and consequences of regional variation in the ecology and life history of a reef fish. Oecologia 145:394-403.
- Ruttenberg, B. I., S.L. Hamilton, M. J. H. Hickford, G.L. Paradis, M. S. Sheehy, J. D. Standish, O. Ben-Tzvi, and R. R. Warner., 2005. Elevated levels of trace elements in cores of otoliths and their potential for use as natural tags. Marine Ecology Progress Series 297:273-281.
- Sax, D. F., and S. D. Gaines., 2005. The Biogeography of Naturalized Species and the Species-Area Relationship: Reciprocal Insights to Biogeography and Invasion Biology. in M. W. Cadotte, S. M. McMahon, and T. Fukami, editors. Conceptual ecology and invasions biology: reciprocal approaches to nature.
- Sax, D.F., B. P. Kinlan, and K. F. Smith., 2005. A conceptual framework for comparing species assemblages in native and exotic habitats. Oikos 108:457-464.
- Somero, G. N., 2005. Linking biogeography to physiology: Evolutionary and acclimatory adjustments of thermal limits. Frontiers in Zoology 2:1.
- Stenseng, E., Braby, C., and Somero, G., 2005. Evolutionary and acclimation-induced variation in thermal limits of heart function in congeneric marine snails (genus Tegula): Implications for vertical zonation. The Biological Bulletin 208:138-144.
- Warner, R. R., S. E. Swearer, J. E. Caselle, M. Sheehy, and G. Paradis., 2005. Natal trace-elemental signatures in the otoliths of an open-coast fish. Limnology and Oceanography 50:1529-1542.
- Zacherl, D. C., 2005. Spatial and temporal variation in statoliths and protoconchs as natural tags to track larval dispersal. Marine Ecology Progress Series. 290:135-143.
- Zacherl, D. C., 2005. An exploration of spatial and temporal variation in statoliths and protoconchs as natural tags to track larval dispersal. Marine Ecology Progress Series 290:145-163.
- 2004
- Adreani, M. S., B. E. Erisman, and R. R. Warner., 2004. Observations of courtship behavior and spawning in the California sheephead, Semicossyphus pulcher (Pisces: Labridae). Environmental Biology of Fishes 71:13-19.
- Allison, G. W., 2004. The influence of species diversity and stress intensity on community resistance and resilience. Ecological Monographs 74:117-134.
- Ammann, A. J., 2004. SMURFs: Standard Monitoring Units for the Recruitment of temperate reef Fishes. Journal of Experimental Marine Biology and Ecology 99:135-154.
- Beckenbach, E., and L. Washburn., 2004. Low frequency waves in the Santa Barbara Channel observed by high frequency radar. Journal of Geophysical Research (Oceans) 109.
- Bracken, M. E. S., 2004. Invertebrate-mediated ammonium loading increases growth of an intertidal macroalga. Journal of Phycology: 1032-1041.
- Bracken, M. E. S., and K. J. Nielsen., 2004. Diversity of intertidal macroalgae increases with nitrogen loading by invertebrates. Ecology 85:2828-2836.
- Denny, M., C. Harley, G. Leonard, B. Helmuth, L. Hunt, and E. Nelson., 2004. Quantifying scale in ecology: lessons from a wave-swept shore. Ecological Monographs 74:513-532.
- Emery, B. M., L. Washburn, and J. A. Harlan., 2004. Evaluating radial current measurements from CODAR high-frequency radars with moored current meters. Journal of Atmospheric and Oceanic Technology 21:1259-1271.
- Forde, S. E., and D. F. Doak., 2004. Multitrophic interactions mediate recruitment variability in a rocky intertidal community. Marine Ecology Progress Series 275:33-45.
- Forde, S. E., and P. T. Raimondi., 2004. An experimental test of the effects of variation in recruitment intensity on intertidal community structure. Journal of Experimental Marine Biology and Ecology 301:1-14.
- Gaylord, B., D. C. Reed, L. Washburn, and P. T. Raimondi., 2004. Physical-biological coupling in spore dispersal of kelp forest macroalgae. Journal of Marine Systems 49:19-39.
- Giller, P., H. Hillebrand, U. G. Berninger, M. Gessner, S. Hawkins, P. Inchausti, C. Inglis, H. Leslie, B. Malmqvist, M. Monaghan, P. Morin, and G. O'Mullan., 2004. Biodiversity effects on ecosystem functioning: emerging issues and their experimental test in aquatic communities. Oikos 104:423-436.
- Grantham, B. A., F. Chan, K. J. Nielsen, D. S. Fox, J. A. Barth, A. Huyer, J. Lubchenco, and B. A. Menge., 2004. Upwelling-driven nearshore hypoxia signals ecosystem and oceanographic changes in the northeast Pacific. Nature 429:749-754.
- Guichard, F., S. A. Levin, A. Hastings, and D. Siegel., 2004. Toward a dynamic metacommunity approach to marine reserve theory. Bioscience 54:1003-1011.
- Halpern, B., S. D. Gaines, and R. R. Warner., 2004. Confounding effects of the export of production and the displacement of fishing effort from marine reserves. Ecological Applications 14:1248-1256.
- Halpin, P. M., B. A. Menge, and G. A. Hofmann., 2004. Experimental demonstration of plasticity in the heat shock response of the intertidal mussel, Mytilus californianus (Conrad). Marine Ecology Progress Series.
- Luengen, A. C., C. S. Friedman, P. T. Raimondi, and A. R. Flegal., 2004. Evaluation of mussel immune responses as indicators of contamination in San Francisco Bay. Marine Environmental Research 57:197-212.
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- Menge, B. A., C. Blanchette, P. Raimondi, T. Freidenburg, S. Gaines, J. Lubchenco, D. Lohse, G. Hudson, M. Foley, and J. Pamplin., 2004. Species interaction strength: Testing model predictions along an upwelling gradient. Ecological Monographs 74:663-684.
- Muñoz, R. C., and R. R. Warner., 2004. Testing a new version of the size-advantage hypothesis for sex change: sperm competition and size-skew effects in the bucktooth parrotfish, Sparisoma radians. Behavioral Ecology 15:129-136.<
- Nielsen, K. J., and S. A. Navarrete., 2004. Mesoscale regulation comes from the bottom-up: Intertidal interactions between consumers and upwelling. Ecology Letters 7:31-41.
- Phillips, N. E., 2004. Variable timing of larval food has consequences for early juvenile performance in a marine mussel. Ecology 85:2341-2346.
- Raimondi, P. T., D.C. Reed, B. Gaylord, and L. Washburn., 2004. Effects of self-fertilization in the giant kelp, Macrocystis pyrifera. Ecology 85:3267-3276.
- Sorte, C. J. B., and G. E. Hofmann., 2004. Changes in latitudes, changes in aptitudes: Nucella canaliculata are more stressed at their range edge. Marine Ecology Progress Series 274:263-268.
- Thornber, C. S., and S. D. Gaines., 2004. Population demographics in species with biphasic life cycles Ecological Monographs 85:1661-1674.
- 2003
- Airamé, S., J. E. Dugan, K. D. Lafferty, H. M. Leslie, D. A. McArdle, and R. R. Warner., 2003. Applying ecological criteria to marine reserve design: a case study from the California Channel Islands. Ecological Applications 13:S170-184.
- Allison, G. W., S. D. Gaines, J. Lubchenco, and H. P. Possingham., 2003. Ensuring persistence of marine reserves: Catastrophes require adopting an insurance factor. Ecological Applications 13:S8-24.
- Bergen, L. K., and M. H. Carr., 2003. Establishing Marine Reserves: How Can Science Best Inform Policy? Environment 45:8-19.
- Carr, M. H., J. Neigel, S. Andelman, J. Estes, J. Lagier, and R. R. Warner., 2003. Environmental and ecological differences between terrestrial and marine systems: implications for the objectives and design of protected areas. Ecological Applications 13:S90-107.
- Caselle, J. E., S. L. Hamilton, and R. R. Warner., 2003. The interaction of retention, recruitment and density-dependent mortality in the spatial placement of marine reserves. Gulf and Caribbean Research Supplement 14:107-118.
- Denny, M. W., and B. B. Hale., 2003. Cyberkelp: An integrative approach to the modelling of flexible organisms. Philosophical Transactions of the Royal Society 358:1535-1542.
- Fauvelot, C., G. Bernardi, and S. Planes., 2003. Reductions in the mitochondrial dna diversity of coral reef fish provide evidence of population bottlenecks resulting from holocene sea-level change. Evolution 57:1571-1583.
- Gaines, S. D., B. Gaylord, and J. L. Largier., 2003. Avoiding current oversights in marine reserve design. Ecological Applications 13:S32-46.
- Gaylord, B., M. W. Denny, and M. A. R. Koehl., 2003. Modulation of wave forces on kelp canopies by alongshore currents. Limnology and Oceanography 48:860-871.
- Gerber, L. R., S. J. Andelman, L. W. Botsford, S. D. Gaines, A. Hastings, S. R. Palumbi, and H. P. Possingham., 2003. Population models for marine reserve design: A retrospective and prospective synthesis. Ecological Applications 13:S47-64.
- Grantham, B., G. L. Eckert, and A. L. Shanks., 2003. Dispersal potential of marine invertebrates in diverse habitats. Ecological Applications 13:S108-116.
- Guichard, F., P. M. Halpin, G. W. Allison, J. Lubchenco, and B. A. Menge., 2003. Mussel disturbance dynamics: signatures of oceanographic forcing from local interactions. American Naturalist 161:889-904.
- Halpern, B., and R. R. Warner., 2003. Matching marine reserve design to reserve objectives. Proceedings of the Royal Society B 270:1871-1878.
- Halpern, B. S., 2003. The impact of marine reserves: do reserves work and does reserve size matter? Ecological Applications 13:S117-137.
- Halpin, P. M., P. T. Strub, B. Peterson, and T. Baumgartner., 2003. An overview of interactions among oceanography, marine ecosystems, climatic and human disruptions along the eastern margins of the Pacific Ocean. Pages Xxi+361 pp in G. A. Bradshaw, P. A. Marquet, and H. A. Mooney, editors. How landscapes change: Human Disturbance and Ecosystem Disruption in the Americas . Springer-Verlag, Berlin, Germany.
- Harley, C., K. Smith, and V. Moore., 2003. Environmental variability and biogeography: the relationship between bathymetric distribution and geographical range size in marine algae and gastropods. Global Ecology and Biogeography 12:499-506.
- Harley, C. D. G., and J. P. Lopez., 2003. The natural history, thermal physiology, and ecological impacts of an intertidal mesopredator, Oedoparena glauca (Diptera: Dryomyzidae). Invertebrate Biology 122:61-73.
- Hickford, M. J. H., and D. R. Schiel., 2003. Comparative dispersal of larvae from demersal versus pelagic spawning fish. Marine Ecology Progress Series 252:255-271.
- Kinlan, B. P., and S. D. Gaines., 2003. Propagule dispersal in marine and terrestrial environments: a community perspective. Ecology 84:2007-2020.
- Leslie, H., M. H. Ruckelshaus, I. R. Ball, and S. Andelman., 2003. Using siting algorithms in the design of marine reserve networks. Ecological Applications 13:S185-198.
- Lubchenco, J., 2003. Waves of the future: Sea changes for a sustainable world. Pages 21-32 in J. G. Speth, editor. Globalization and the Environment. Island Press, Washington DC.
- Lubchenco, J., S.R. Palumbi, S.D. Gaines, and S. Andelman (eds)., 2003. The Science of Marine Reserves. Special Issue of Ecological Applications 13: S 1-228.
- Lubchenco, J., 2003. Charting a New Course in U.S. Ocean Policy. In: Convergence of U.S. National Security and the Global Environment. Aspen Institute Congressional Program 18 (3): 41-46.
- Lubchenco, J., 2003. The Blue Revolution: A Global Ecological Perspective. World Aquaculture. December 2003: 8-10.
- Lubchenco, J., S. R. Palumbi, S. D. Gaines, and S. Andelman., 2003. Plugging a hole in the ocean: The emerging science of marine reserves. Ecological Applications 13:S3-7.
- Menge, B. A., 2003. The overriding importance of environmental context in determining the consequences of species deletion experiments. Pages 16-43 in P. M. Kareiva and S. A. Levin, editors. The Importance of Species: Perspectives on Expendability and Triage. Princeton University Press, Princeton, NJ.
- Menge, B.A., J. Lubchenco, M.E.S. Bracken, F. Chan, M.M. Foley, T.L. Freidenburg, S.D. Gaines, G. Hudson, C. Krenz, H. Leslie, D.N.L. Menge, R. Russell and M. Webster., 2003. Coastal oceanography sets the pace of rocky intertidal community dynamics. Proceedings of the National Academy of Sciences 21: 12229-12234.
- Muñoz, R. C., and R. R. Warner., 2003. Alternative contexts of sex change with social control the bucktooth parrotfish, Sparisoma radians. Environmental Biology of Fishes 68:307-319.
- Muñoz, R. C., and R. R. Warner., 2003. A new version of the size-advantage hypothesis for sex change: incorporating sperm competition and size-fecundity skew. American Naturalist 161:749-761.
- Nielsen, K. J., 2003. Nutrient loading and consumers: agents of change in open-coast macrophyte assemblages. Proceedings of the National Academy of Sciences 100:7760-7665.
- Palumbi, S. R., S. D. Gaines, H. Leslie, and R. R. Warner., 2003. New wave: high-tech tools to help marine reserve research. Frontiers in Ecology and the Environment 1:73-79.
- Palumbi, S. R., and R. R. Warner., 2003. Why gobies are like hobbits. Science 299:51-52.
- Pandolfi, J. M., R. H. Bradbury, E. Sala, T. P. Hughes, K. A. Bjorndal, R. G. Cooke, D. McArdle, L. McClenachan, M. J. H. Newman, G. Paredes, R. R. Warner, and J. B. C. Jackson., 2003. Global trajectories of the long-term decline of coral reef ecosystems. Science 301:955-958.
- Roberts, C., S. Andelman, G. Branch, R. Bustamante, J. C. Castilla, J. Dugan, B. Halpern, H. Leslie, K. Lafferty, J. Lubchenco, D. McArdle, H. Possingham, M. Ruckelshaus, and R. R. Warner., 2003. Ecological criteria for evaluating candidate sites for marine reserves. Ecological Applications 13:S199-214.
- Roberts, C., G. Branch, R. Bustamante, J. C. Castilla, J. Dugan, B. Halpern, H. Leslie, K. Lafferty, J. Lubchenco, D. McArdle, M. Ruckelshaus, and R. R. Warner., 2003. Application of ecological criteria in selecting marine reserves and developing reserve networks. Ecological Applications 13:S215-228.
- Sanford, E., M. S. Roth, G. C. Johns, J. P. Wares, and G. N. Somero., 2003. Local selection and latitudinal variation in a marine predator-prey interaction. Science 300:1135-1137.
- Sax, D. F., and S. D. Gaines., 2003. Species diversity: from global decreases to local increases. Trends in Ecology and Evolution 18:561-566.
- Shanks, A. L., B. Grantham, and M. H. Carr., 2003. Propagule dispersal distance and the size and spacing of marine reserves. Ecological Applications 13:S159-169.
- Shima, J. S., and C. W. Osenberg., 2003. Cryptic density dependence: effects of spatio-temporal covariation between density and site quality in reef fish. Ecology 84:46-52.
- Siegel, D. A., B. P. Kinlan, B. Gaylord, and S. D. Gaines., 2003. Lagrangian descriptions of marine larval dispersion. Marine Ecology Progress Series 260:83-96.
- Smith, K. F., and S. D. Gaines., 2003. Rapoport's bathymetric rule and the latitudinal species diversity gradient for Northeast Pacific fishes and Northwest Atlantic gastropods: evidence against a casual link. Journal of Biogeography 30:1153-1159.
- Stillman, J. H., 2003. Acclimation capacity underlies susceptibility to climate change. Science 301:65.
- Storlazzi, C. D., M. A. McManus, and J. D. Figurski., 2003. Long-term high-frequency ADCP and temperature measurements along central California : Insights into upwelling and internal waves on the innershelf. Continental Shelf Research 901-918.
- Strathmann, R. R., T. P. Hughes, A. M. Kuris, K. C. Lindeman, S. G. Morgan, J. M. Pandolfi, and R. R. Warner., 2003. Evolution of self-recruitment and its consequences for marine populations. Bulletin of Marine Science 70:377-396.
- Swearer, S. E., S. R. Thorrold, J. S. Shima, M. E. Hellberg, G. P. Jones, D. R. Robertson, S. G. Morgan, K. A. Selkoe, G. M. Ruiz, and R. R. Warner., 2003. Evidence of self-recruitment in demersal marine populations. Bulletin of Marine Science 70:251-271.
- Thornber, C. S., and S. D. Gaines., 2003. Spatial and temporal variation of haploids and diploids in populations of four congeners of the marine alga Mazzaella Marine Ecology Progress Series 258:65-77.
- Thorrold, S. R., G. P. Jones, M. E. Hellberg, R. S. Burton, S. E. Swearer, J. E. Neigel, S. G. Morgan, and R. R. Warner., 2003. Quantifying larval retention and connectivity in marine populations with artificial and natural markers: can we do it right? Bulletin of Marine Science 70:291-308.
- Tomanek, L., and E. Sanford., 2003. Heat-shock protein 70 (HSP70) as a biochemical stress indicator: an experimental field test in two congeneric intertidal gastropods (Genus: Tegula). Biological Bulletin 205:276-284.
- Warner, R. R., and R. K. Cowen., 2003. Local retention of production in marine populations: evidence, mechanisms, and consequences. Bulletin of Marine Science 70:245-249.
- Warner, R. R., and S. R. Palumbi., 2003. Larvae retention: Genes or oceanography? Science 300:1658.
- Webster, M. S., 2003. Temporal density dependence and population regulation in a marine fish. Ecology 84:623-628.
- Zacherl, D. C., S. D. Gaines, and S. I. Lonhart., 2003. The limits to biogeographical distributions: insights into the northward range extension of the marine snail, Kelletia kelletii (Forbes, 1852). Journal of Biogeography 30:1-12.
- Zacherl, D. C., P. H. Manríquez, G. Paradis, R. W. Day, J. C. Castilla, R. R. Warner, D. W. Lea, and S. D. Gaines., 2003. Trace elemental fingerprinting of gastropod statoliths to study larval dispersal trajectories. Marine Ecology Progress Series 248:297-303.
- Zacherl, D. C., G. Paradis, and D. W. Lea., 2003. Barium uptake in larval protoconch and statolith of the marine neogastropod Kelletia kelletii. Geochimica et Cosmochimica Acta 67:4091-4099
- 2002
- Blanchette, C. A., S. D. Gaines, and B. Miner., 2002. Geographic variability in form, size and survival of Egregia menziesii around Point Conception, California. Marine Ecology Progress Series 239:69-82.
- Dahlhoff, E. P., J. H. Stillman, and B. A. Menge., 2002. Physiological community ecology: variation in metabolic activity of ecologically important rocky intertidal invertebrates along environmental gradients. Integrative and Comparative Biology 42:862-871.
- Denny, M., and B. Gaylord., 2002. The mechanics of wave-swept algae. Journal of Experimental Biology 205:1355-1362.
- Denny, M. W., and L. M.Roberson., 2002. Blade motion and nutrient flux to the kelp, Eisenia arborea. Biological Bulletin 203:1-13.
- Denny, M. W., E. K. Nelson, and K. S. Mead., 2002. Revised estimates of the effects of turbulence on fertilization in the purple sea urchin, Strongylocentrotus purpuratus. Biological Bulletin 203:275-277.
- Gaylord, B., D. C. Reed, P. T. Raimondi, L. Washburn, and S. R. McLean., 2002. A physically-based model of macroalgal spore dispersal in the wave and current-dominated nearshore. Ecology 83:1239-1251.
- Halpern, B. S., and R. R. Warner., 2002. Marine reserves have rapid and lasting effects. Ecology Letters 5:361-367.
- Halpin, P. M., C. J. Sorte, G. E. Hofmann, and B. A. Menge., 2002. Patterns of variation in levels of Hsp70 in natural rocky shore populations from microscales to mesoscales. Integrative and Comparative Biology 42:110-112.
- Helmuth, B., C. D. G. Harley, P. M. Halpin, M. O’Donnell, G. E. Hofmann, and C. A. Blanchette., 2002. Change and latitudinal patterns of intertidal thermal stress. Science 298:1015-1017.
- Levin, P. S., and C. B. Grimes., 2002. Management of tropical fisheries: lessons from reef fish ecology. Pages 377-389 in P. F. Sale, editor. Coral Reef Fishes. Dynamics and diversity in a complex ecosystem. Academic Press, San Deigo, CA.
- Lubchenco, J., R. Davis-Born, and B. Simler., 2002. Lessons from land for protection in the sea: The need for a new ocean ethic. Open Spaces 5:1.
- Lubchenco, J., S. D. Gaines, R. R. Warner, S. Airame, and B. Simler., 2002. The Science of Marine Reserves. Partnership for Interdisciplinary Studies of Coastal Oceans.
- Menge, B., A. Olson, and E. Dahlhoff., 2002. Environmental stress, bottom-up effects, and community dynamics: integrating molecular-physiological with ecological approaches. Integrative and Comparative Biology 42:892-908.
- Menge, B. A., E. Sanford, B. A. Daley, T. L. Freidenburg, G. Hudson, and J. Lubchenco., 2002. An inter-hemispheric comparison of bottom-up effects on community structure: insights revealed using the comparative-experimental approach. Ecological Research 17:1-16.
- Nishimoto, M. M., and L. Washburn., 2002. Patterns of coastal eddy circulation and abundance of pelagic juvenile fish in the Santa Barbara Channel, California, USA. Marine Ecology Progress Series 241:183-199.
- Petersen, C. W., and R. R. Warner., 2002. The reproductive behavior of coral reef fishes in an ecological context. Pages 103-118 in P. F. Sale, editor. Coral Reef Fishes: New Insights into their Ecology. Academic Press, San Diego, CA.
- Phillips, N. E., 2002. Effects of nutrition-mediated larval condition on juvenile performance in a marine mussel. Ecology 83:2562-2574.
- Phillips, N. E., and S. D. Gaines., 2002. Spatial and temporal variability in size at settlement of intertidal mytilid mussels from around Pt. Conception, California. Invertebrate Reproduction and Development 41:171-177.
- Raimondi, P. T., C. M. Wilson, R. F. Ambrose, J. M. Engel, and T. E. Minchinton., 2002. El Niño and the continued declines of black abalone along the coast of California. Marine Ecology Progress Series 242:143-152.
- Raimondi, P. T., C. M. Wilson, R. F. Ambrose, J. M. Engle, and T. E. Minchinton., 2002. Continued declines of black abalone along the coast of California : Are mass mortalities related to El Niño events? Marine Ecology Progress Series 242:143-152.
- Sagarin, R., and S. Gaines., 2002. The "abundant center" distribution: to what extent is it a biogeographic rule? Ecology Letters 5:137-147.
- Sagarin, R., and S. D. Gaines., 2002. The many forms of species' abundance distributions. Journal of Biogeography 29:985-997.
- Sanford, E., 2002. The feeding, growth, and energetics of two rocky intertidal predators (Pisaster ochraceus and Nucella canaliculata) under water temperatures simulating episodic upwelling. Journal of Experimental Marine Biology and Ecology 273:199-218.
- Sanford, E., 2002. Water temperature, predation, and the neglected role of physiological rate effects in rocky intertidal communities. Integrative and Comparative Biology 42:881-891.
- Sax, D. F., 2002. Native and naturalized plant diversity are positively correlated in scrub communities of California and Chile. Diversity and Distributions 8:193-210.
- Sax, D. F., J. H. Brown, and S. D. Gaines., 2002. Species invasions exceed extinctions on islands world-wide: a comparative study of plants and birds. American Naturalist 160:766-783.
- Shima, J. S., 2002. Mechanisms of density- and number-dependent population regulation of a coral reef fish. Marine and Freshwater Research 53:175-179.
- Shima, J. S., and A. M. Findlay., 2002. Pelagic larval growth rate impacts benthic settlement and survival of a temperate reef fish. Marine Ecology Progress Series 235:303-309.
- Simler, B., R. Davis-Born, A. Guerry, H. Leslie, and J. Lubchenco., 2002. Catalogue of Oregon marine and coastal information: Meta-data to inform area-based management. Proceedings of the 2002 Conference of The Coastal Society.
- Somero, G. N., 2002. Thermal physiology and vertical zonation of intertidal animals: optima, limits, and costs of living Integrative and Comparative Biology 42:780-789.
- Stillman, J. H., 2002. Causes and consequence of thermal tolerance limits in intertidal crabs, genus Petrolisthes. Integrative and Comparative Biology 42:790-796.
- Tomanek, L., 2002. The heat-shock response: its variation, regulation and ecological importance in intertidal gastropods (genus Tegula). Integrative and Comparative Biology 42:797-807.
- Tomanek, L., and B. Helmuth., 2002. Physiological ecology of rocky intertidal organisms: A synergy of concepts. Integrative and Comparative Biology 42:771-775.
- Tomanek, L., and G. N. Somero., 2002. Interspecific- and acclimation-induced variation in levels of heat-shock proteins 70 (hsp70) and 90 (hsp90) and heat-shock transcription factor-1 (HSF1) in congeneric marine snails (genus Tegula): implications for regulation of hsp gene e Journal of Experimental Biology 205:677-685.
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- 2001
- Botsford, L. W., A. Hastings, and S. D. Gaines., 2001. Dependence of sustainability on the configuration of marine reserves and larval dispersal distance Ecology Letters 4:144-150.
- Connolly, S. R., B. A. Menge, and J. Roughgarden., 2001. A latitudinal gradient in recruitment of intertidal invertebrates in the Northeast Pacific Ecology 82:1799-1813.
- Cudaback, C. N., and J. L. Largier., 2001. The cross-shelf structure of wind- and buoyancy-driven circulation over the North Carolina inner shelf. Continental Shelf Research 1:1649-1668.
- Dahlhoff, E. P., B. B. Buckley, and B. A. Menge., 2001. Physiology of the rocky intertidal predator Nucella ostrina along an environmental stress gradient. Ecology 82:2816-2829.
- Gaylord, B., B. B. Hale, and M. W. Denny., 2001. Consequences of transient fluid forces for compliant benthic organisms. Journal of Experimental Biology 204:1347-1360.
- Gracey, A., J. Troll, and G. N. Somero., 2001. Hypoxia-induced gene expression profiling in the euryoxic fish G. mirabilis Proceedings of the National Academy of Science 98:1993-1998
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- Menge, B. A., and G. M. Branch., 2001. Rocky intertidal communities. Pages 221-251 in M. D. Bertness, S. D. Gaines, and M. Hay, editors. Marine Community Ecology. Sinauer Associates, Sunderland, MA.
- Menge, B. A., and T. L. Freidenburg., 2001. Keystone Species. Pages 613-631 in S. A. Levin, editor. Encyclopedia of Biodiversity. Academic Press, New York.
- Nielsen, K. J., 2001. Bottom-up and top-down forces in tidepools: test of a food chain model in an intertidal community. Ecological Monographs 71:187-217.
- Petersen, C. W., R. R. Warner, D. Y. Shapiro, and A. Marconato., 2001. Components of fertilization success in the bluehead wrasse, Thalassoma bifasciatum. Behavioral Ecology 12:237-245.
- Planes, S., P. Doherty, and G. Bernardi., 2001. Unusual case of extreme genetic divergence in a marine fish, Acanthochromis polyacanthus, within the Great Barrier Reef and the Coral Sea. Evolution 55:2263-2273.
- Roberts, C. M., B. Halpern, S. R. Palumbi, and R. R. Warner., 2001. Designing marine reserve networks: why small, isolated protected areas are not enough. Conservation Biology in Practice 2:11-17.
- Sanford, E., and B. A. Menge., 2001. Spatial and temporal variation in barnacle growth in a coastal upwelling system. Marine Ecology Progress Series 209:143-157.
- Sax, D. F., 2001. Latitudinal gradients and geographic ranges of exotic species: implications for biogeography. Journal of Biogeography 28:139-150.
- Sorte, C., W. T. Peterson, C. A. Morgan, and R. L. Emmett., 2001. Larval dynamics of the sand crab, Emerita analoga, off the central Oregon coast during a strong El Niño period. Journal of Plankton Research 23:939-944.
- Stillman, J. H., and G. N. Somero., 2001. A comparative analysis of the evolutionary patterning and mechanistic bases of LDH thermal stability in porcelain crabs, genus Petrolisthes. Journal of Experimental Biology 204:767-776.
- Wares, J., S. D. Gaines, and C. Cunningham., 2001. A comparative study of asymmetric migration events across a marine biogeographic boundary. Evolution 55:295-306.
- Warner, R. R., 2001. Synthesis: Environment, mating systems, and life-history allocations in the bluehead wrasse, Thalassoma bifasciatum. Pages 227-244 in L. Dugatkin, editor. Model Systems in Behavioral Ecology. Academic Press, San Diego, CA.
- 2000
- Carr, M. H., 2000. Marine protected areas: challenges and opportunities for understanding and conserving coastal marine ecosystems. Environmental Conservation 27:106-109.
- Cudaback, C. N., and D. A. Jay., 2000. Tidal asymmetry in an estuarine pycnocline: Depth and thickness. Journal of Geophysical Research 105:26237-26251.
- Daily, G. C., T. Soderqvist, S. Aniyar, K. Arrow, P. Dasgupta, P. R. Ehrlich, C. Folke, A. M. Jansson, B.-O. Jansson, N. Kautsky, S. A. Levin, J. Lubchenco, K.-G. Maler, D. Simpson, D. Starrett, D. Tilman, and B. Walker., 2000. The value of nature and the nature of value. Science 289:395-396.
- Dasgupta, P., S. Levin, and J. Lubchenco., 2000. Economic pathways to ecological sustainability. Bioscience 50:339-345.
- Davis-Born, R., J. Lubchenco, B. Menge, G. Allison, B. Grantham, P. Halpin, and C. Schoch., 2000. PISCO: A long-term ecological consortium studying the influence of nearshore oceanography on coastal marine communities. Proceedings of the 2000 Conference of the Coastal Society.
- Gaylord, B., and S. D. Gaines., 2000. Temperature or transport? Range limits in marine species mediated solely by flow. American Naturalist 155:769-789.
- Levin, P. S., N. Tolimieri, M. Nicklin, and P. F. Sale., 2000. Integrating individual behavior and population ecology: the potential for habitat-dependent population regulation in a reef fish. Behavioral Ecology 11:565-571.
- Lubchenco, J., and R. Davis-Born., 2000. A changing role for National Marine Sanctuaries in the New Millennium. National Marine Sanctuary Program website.
- Menge, B. A., 2000. Recruitment vs. post-recruitment processes as determinants of barnacle population abundance. Ecological Monographs 70:265-288.
- Menge, B. A., 2000. Top-down and bottom-up regulation in marine rocky intertidal habitats. Journal of Experimental Marine Biology and Ecology 250:257-289.
- Navarette, S. A., B. A. Menge, and B. A. Daley., 2000. Species interactions in intertidal food webs: prey or predation regulation of intermediate predators? Ecology 81:2264-2277.
- Naylor, R. L., R. J. Goldburg, J. Primavera, N. Kautsky, M. Beveridge, J. Clay, C. Folke, J. Lubchenco, H. Mooney, and M. Troell., 2000. Effect of growth in aquaculture on world fish supplies Nature 405:1017-1024.
- Petrik, R., and P. S. Levin., 2000. Estimating relative abundance of seagrass fishes: a quantitative comparison of three methods. Environmental Biology of Fishes 58:461-466.
- Raimondi, P. T., S. E. Forde, L. F. Delph, and C. M. Lively., 2000. Processes structuring communities: evidence for trait-mediated indirect effects through induced polymorphisms. Oikos 91:353-361.
- Raimondi, P. T., and A. N. C. Morse., 2000. Complex larval behavior and the vertical distribution and orientation of Agaricia humilis (Scleractinia). Ecology 81:3193-3211
- Reed, D. C., M. H. Carr, L. Goldwasser, and P. T. Raimondi., 2000. Role of dispersal potential in determining the spatial structure of an assemblage of sedentary marine organisms. Ecology 81:2011-2026.
- Sax, D., and J. Brown., 2000. The paradox of invasion. Global Ecology and Biogeography 9:363-371.
- Warner, R. R., S. E. Swearer, and J. E. Caselle., 2000. Larval accumulation and retention: implications for the design of marine reserves and essential fish habitat. Bulletin of Marine Science 66:821-830.
- 1999
- Ayensu, E., D. v. R. Claasen, M. Collins, A. Dearing, L. Fresco, M. Gadgil, H. Gitay, G. Glaser, C. Juma, J. Krebs, R. Lenton, J. Lubchenco, J. A. McNeeley, H. Mooney, P. Pinstrup-Andersen, M. Ramon, P. Raven, W. V. Reid, C. Samper, and A. H. Zakri., 1999. Is the time right for and international ecosystem assessment? Science 286:685-686.
- Carr, M. H., and P. T. Raimondi., 1999. Marine protected areas as a precautionary approach to management. California Cooperative Oceans Fisheries Investigations Reports 40:1-6.
- Lubchenco, J., and R. Davis-Born., 1999. A resolution for the millennium Ocean and Coastal Policy Network News 1:3.
- Petrik, R., P. S. Levin, G. W. Stunz, and J. Malone., 1999. Recruitment of Atlantic Croaker, Micropogonias undulatus: Do post-settlement processes disrupt or reinforce initial patterns of settlement? Fishery Bulletin 97:954-961
- Swearer, S. E., J. E. Caselle, D. W. Lea, and R. R. Warner., 1999. Larval retention and recruitment in an island population of a coral-reef fish. Nature 402:799-802.
- Taylor, P. H., and S. D. Gaines., 1999. Can Rapoport's Rule be Rescued?: Modeling causes of the latitudinal gradient in species richness. Ecology 80:2474-2482.